2W1C Transferase date Oct 17, 2008
title Structure Determination Of Aurora Kinase In Complex With Inhibitor
authors S.Howard, V.Berdini, J.A.Boulstridge, M.G.Carr, D.M.Cross, J.Curry, L.A.Devine, T.R.Early, L.Fazal, A.L.Gill, M.Heathcote, S.Maman, J.E.Matthews, R.L.Mcmenamin, E.F.Navarro, M.A.O'Brien, M.O'Reilly, D.C.Rees, M.Reule, D.Tisi, G.Williams, M.Vinkovic, P.G.Wyatt
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Kinase Domain, Residues 122-389
Synonym: Aurora Kinase A, Serinethreonine Kinase 15, Auroraipl1-Related Kinase 1, Breast Tumor-Amplified Kinase, Aurora A, Aurora-A, Aurora-Related Kinase 1, Hark1;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet 23a
symmetry Space Group: P 61 2 2
R_factor 0.244 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.864 82.864 168.193 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.24 Å
ligand L0C, TPO enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFragment-based discovery of the pyrazol-4-yl urea (AT9283), a multitargeted kinase inhibitor with potent aurora kinase activity., Howard S, Berdini V, Boulstridge JA, Carr MG, Cross DM, Curry J, Devine LA, Early TR, Fazal L, Gill AL, Heathcote M, Maman S, Matthews JE, McMenamin RL, Navarro EF, O'Brien MA, O'Reilly M, Rees DC, Reule M, Tisi D, Williams G, Vinkovic M, Wyatt PG, J Med Chem. 2009 Jan 22;52(2):379-88. PMID:19143567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (2w1c.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 2W1C
  • CSU: Contacts of Structural Units for 2W1C
  • Likely Quarternary Molecular Structure file(s) for 2W1C
  • Structure Factors (94 Kb)
  • Retrieve 2W1C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W1C from S2C, [Save to disk]
  • Re-refined 2w1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W1C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W1C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W1C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w1c_A] [2w1c]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 2W1C: [S_TKc ] by SMART
  • Other resources with information on 2W1C
  • Community annotation for 2W1C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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