2W1I Transferase date Oct 17, 2008
title Structure Determination Of Aurora Kinase In Complex With Inhibitor
authors S.Howard, V.Berdini, J.A.Boulstridge, M.G.Carr, D.M.Cross, J.Curry, L.A.Devine, T.R.Early, L.Fazal, A.L.Gill, M.Heathcote, S.Maman, J.E.Matthews, R.L.Mcmenamin, E.F.Navarro, M.A.O'Brien, M.O'Reilly, D.C.Rees, M.Reule, D.Tisi, G.Williams, M.Vinkovic, P.G.Wyatt
compound source
Molecule: Jak2
Chain: A, B
Fragment: Kinase Domain, Residues 835-1132
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Homo Sapiens
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbac
symmetry Space Group: C 1 2 1
R_factor 0.204 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.757 93.129 123.269 90.00 146.58 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand L0I, PTR enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFragment-based discovery of the pyrazol-4-yl urea (AT9283), a multitargeted kinase inhibitor with potent aurora kinase activity., Howard S, Berdini V, Boulstridge JA, Carr MG, Cross DM, Curry J, Devine LA, Early TR, Fazal L, Gill AL, Heathcote M, Maman S, Matthews JE, McMenamin RL, Navarro EF, O'Brien MA, O'Reilly M, Rees DC, Reule M, Tisi D, Williams G, Vinkovic M, Wyatt PG, J Med Chem. 2009 Jan 22;52(2):379-88. PMID:19143567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (2w1i.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (2w1i.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 2W1I
  • CSU: Contacts of Structural Units for 2W1I
  • Likely Quarternary Molecular Structure file(s) for 2W1I
  • Structure Factors (279 Kb)
  • Retrieve 2W1I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W1I from S2C, [Save to disk]
  • Re-refined 2w1i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W1I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W1I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W1I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w1i_B] [2w1i_A] [2w1i]
  • SWISS-PROT database: [O60674]
  • Domain organization of [JAK2_HUMAN] by SWISSPFAM
  • Domain found in 2W1I: [TyrKc ] by SMART
  • Other resources with information on 2W1I
  • Community annotation for 2W1I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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