2W1X Hydrolase date Oct 21, 2008
title The Interdependence Of Wavelength, Redundancy And Dose In Sulfur Sad Experiments: 1.284 A Wavelength 360 Images Data
authors M.Cianci, J.R.Helliwell, A.Suzuki
compound source
Molecule: Lysozyme C
Chain: A
Synonym: Lysozyme, 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv, Allergen Gal D 4;
Ec: 3.2.1.17
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 43 21 2
R_factor 0.18302 R_Free 0.22789
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.353 78.353 37.002 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CL, NA enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe interdependence of wavelength, redundancy and dose in sulfur SAD experiments., Cianci M, Helliwell JR, Suzuki A, Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1196-209. Epub, 2008 Nov 18. PMID:19018096
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2w1x.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 2W1X
  • CSU: Contacts of Structural Units for 2W1X
  • Likely Quarternary Molecular Structure file(s) for 2W1X
  • Structure Factors (242 Kb)
  • Retrieve 2W1X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W1X from S2C, [Save to disk]
  • Re-refined 2w1x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W1X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W1X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W1X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w1x_] [2w1x] [2w1x_A]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 2W1X: [LYZ1 ] by SMART
  • Other resources with information on 2W1X
  • Community annotation for 2W1X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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