2W5Q Transferase date Dec 11, 2008
title Structure-Based Mechanism Of Lipoteichoic Acid Synthesis By Staphylococcus Aureus Ltas.
authors D.Lu, M.E.Wormann, X.Zhang, O.Scheewind, A.Grundling, P.S.Freemont
compound source
Molecule: Processed Glycerol Phosphate Lipoteichoic Acid Synthase;
Chain: A
Fragment: Extracellular Domain, Residues 218-641
Synonym: Ltas, Polyglycerol Phosphate Synthase, Lta Synthase;
Engineered: Yes
Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.171 R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.214 57.123 159.452 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand EDO, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS., Lu D, Wormann ME, Zhang X, Schneewind O, Grundling A, Freemont PS, Proc Natl Acad Sci U S A. 2009 Jan 23. PMID:19168632
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (2w5q.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 2W5Q
  • CSU: Contacts of Structural Units for 2W5Q
  • Likely Quarternary Molecular Structure file(s) for 2W5Q
  • Structure Factors (11125 Kb)
  • Retrieve 2W5Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W5Q from S2C, [Save to disk]
  • Re-refined 2w5q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W5Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W5Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W5Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w5q] [2w5q_A]
  • SWISS-PROT database: [Q7A1I3]
  • Domain organization of [LTAS_STAAW] by SWISSPFAM
  • Other resources with information on 2W5Q
  • Community annotation for 2W5Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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