2W6G Hydrolase date Dec 18, 2008
title Low Resolution Structures Of Bovine Mitochondrial F1-Atpase Controlled Dehydration: Hydration State 3.
authors J.Sanchez-Weatherby, F.Felisaz, A.Gobbo, J.Huet, R.B.G.Ravelli, M.W.Bowler, F.Cipriani
compound source
Molecule: Atp Synthase Subunit Alpha Heart Isoform, Mitocho
Chain: A, B, C
Synonym: F1-Atpase Alpha Subunit
Ec: 3.6.3.14
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart
Tissue: Muscle
Organelle: Mitochondria

Molecule: Atp Synthase Subunit Beta, Mitochondrial
Chain: D, E, F
Synonym: F1-Atpase Beta Subunit
Ec: 3.6.3.14

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart
Tissue: Muscle
Organelle: Mitochonria

Molecule: Atp Synthase Subunit Gamma, Mitochondrial
Chain: G
Ec: 3.6.3.14

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart
Tissue: Muscle
Organelle: Mitochonria
symmetry Space Group: P 21 21 21
R_factor 0.330 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.350 132.930 275.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 6.00 Å
ligand
enzyme Hydrolase E.C.3.6.3.14 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


F, D, E


G


Primary referenceImproving diffraction by humidity control: a novel device compatible with X-ray beamlines., Sanchez-Weatherby J, Bowler MW, Huet J, Gobbo A, Felisaz F, Lavault B, Moya R, Kadlec J, Ravelli RB, Cipriani F, Acta Crystallogr D Biol Crystallogr. 2009 Dec;65(Pt 12):1237-46. Epub 2009, Nov 17. PMID:19966409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (394 Kb) [Save to disk]
  • Biological Unit Coordinates (2w6g.pdb1.gz) 385 Kb
  • CSU: Contacts of Structural Units for 2W6G
  • Structure Factors (420 Kb)
  • Retrieve 2W6G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W6G from S2C, [Save to disk]
  • View 2W6G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W6G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W6G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w6g_E] [2w6g_F] [2w6g_G] [2w6g_B] [2w6g_D] [2w6g_A] [2w6g_C] [2w6g]
  • SWISS-PROT database: [P19483] [P00829] [P05631]
  • Domain organization of [ATPA_BOVIN] [ATPB_BOVIN] [ATPG_BOVIN] by SWISSPFAM
  • Domain found in 2W6G: [AAA ] by SMART
  • Other resources with information on 2W6G
  • Community annotation for 2W6G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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