2W8P	Oxidoreductase	date	Jan 19, 2009
title	The Crystal Structure Of Human C340a Ssadh
authors	Y.G.Kim, K.J.Kim
compound		source
Molecule: Succinic Semialdehyde Dehydrogenase Mitochondrial; Chain: A Fragment: Residues 49-535 Synonym: Succinic Semialdehyde Dehydrogenase, Nad(+)-Dependent Succinic Semialdehyde Dehydrogenase, Aldehyde Dehydrogenase Family 5 Member A1; Ec: 1.2.1.24 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M15(Prep4) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe30
symmetry	Space Group: F 4 3 2	R_factor 0.229 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 265.895 265.895 265.895 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	GOL, SO4	enzyme	Oxidoreductase E.C.1.2.1.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Redox-switch modulation of human SSADH by dynamic catalytic loop., Kim YG, Lee S, Kwon OS, Park SY, Lee SJ, Park BJ, Kim KJ, EMBO J. 2009 Apr 8;28(7):959-68. Epub 2009 Mar 19. PMID:19300440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (2w8p.pdb1.gz) 898 Kb Biological Unit Coordinates (2w8p.pdb2.gz) 299 Kb Biological Unit Coordinates (2w8p.pdb3.gz) 151 Kb LPC: Ligand-Protein Contacts for 2W8P CSU: Contacts of Structural Units for 2W8P Likely Quarternary Molecular Structure file(s) for 2W8P Structure Factors (285 Kb) Retrieve 2W8P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2W8P from S2C, [Save to disk] Re-refined 2w8p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2W8P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2W8P

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2W8P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2w8p] [2w8p_A] SWISS-PROT database: [P51649] Domain organization of [SSDH_HUMAN] by SWISSPFAM

Other resources with information on 2W8P

Community annotation for 2W8P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---