2W9M	Dna Replication	date	Jan 27, 2009
title	Structure Of Family X Dna Polymerase From Deinococcus Radiodurans
authors	N.Leulliot, L.Cladiere, F.Lecointe, D.Durand, U.Hubscher, H.Van Tilbeurgh
compound		source
Molecule: Polymerase X Chain: A, B Engineered: Yes		Organism_scientific: Deinococcus Radiodurans Organism_taxid: 1299 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.203 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.930 138.250 67.750 90.00 92.25 90.00
method	X-Ray Diffraction	resolution	2.46 Å
ligand	HG, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	The family X DNA polymerase from deinococcus radiodurans adopts a non-standard extended conformation., Leulliot N, Cladiere L, Lecointe F, Durand D, Hubscher U, van Tilbeurgh H, J Biol Chem. 2009 Feb 26. PMID:19251692

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk] Biological Unit Coordinates (2w9m.pdb1.gz) 86 Kb Biological Unit Coordinates (2w9m.pdb2.gz) 89 Kb LPC: Ligand-Protein Contacts for 2W9M CSU: Contacts of Structural Units for 2W9M Likely Quarternary Molecular Structure file(s) for 2W9M Structure Factors (282 Kb) Retrieve 2W9M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2W9M from S2C, [Save to disk] Re-refined 2w9m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2W9M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2W9M

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2W9M, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2w9m] [2w9m_B] [2w9m_A] SWISS-PROT database: [Q9RX48] Domain organization of [Q9RX48_DEIRA] by SWISSPFAM Domains found in 2W9M: [HhH1] [POLIIIAc] [POLXc ] by SMART

Other resources with information on 2W9M

Community annotation for 2W9M at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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