2WAB Hydrolase date Feb 04, 2009
title Structure Of An Active Site Mutant Of A Family Two Carbohydr Esterase From Clostridium Thermocellum In Complex With Cell
authors C.Montainer, V.A.Money, V.M.R.Pires, J.E.Flint, B.A.Pinheiro, A.G J.A.M.Prates, A.Izumi, H.Stalbrand, K.Kolenova, E.Topakas, E.J.D D.N.Bolam, G.J.Davies, C.M.G.A.Fontes, H.J.Gilbert
compound source
Molecule: Endoglucanase E
Chain: A
Fragment: C Terminal Domain Cel5c-Ces2a, Residues 485-814
Synonym: Endo-1,4-Beta-Glucanase E, Carbohydrate Esterase, E, Ege;
Ec: 3.2.1.4
Engineered: Yes
Mutation: Yes
Organism_scientific: Clostridium Thermocellum
Organism_taxid: 1515
Atcc: 27405
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pet22b
symmetry Space Group: P 21 21 2
R_factor 0.156 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.158 141.235 58.161 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BGC, GOL, IOD enzyme Hydrolase E.C.3.2.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions., Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ, PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (2wab.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 2WAB
  • CSU: Contacts of Structural Units for 2WAB
  • Likely Quarternary Molecular Structure file(s) for 2WAB
  • Structure Factors (352 Kb)
  • Retrieve 2WAB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WAB from S2C, [Save to disk]
  • Re-refined 2wab structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WAB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WAB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WAB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wab_A] [2wab]
  • SWISS-PROT database: [P10477]
  • Domain organization of [GUNE_CLOTM] by SWISSPFAM
  • Other resources with information on 2WAB
  • Community annotation for 2WAB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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