2WD1	Transferase	date	Mar 19, 2009
title	Human C-Met Kinase In Complex With Azaindole Inhibitor
authors	J.Porter, S.Lumb, R.J.Franklin, J.M.Gascon-Simorte, M.Calmiano, K.Le Riche, B.Lallemand, J.Keyaerts, H.Edwards, A.Maloney, J.Delgado, L.King, A.Foley, F.Lecomte, J.Reuberson, C.Meier, M.Batchelor
compound		source
Molecule: Hepatocyte Growth Factor Receptor Chain: A Fragment: Kinase Domain, Residues 1055-1346 Synonym: Scatter Factor Receptor, Hgfsf Receptor, Met Proto-Oncogene Tyrosine Kinase, C-Met; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 1 21 1	R_factor 0.210 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.411 42.312 84.826 90.00 93.01 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	GBL, ZZY BindingDB	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of 4-azaindoles as novel inhibitors of c-Met kinase., Porter J, Lumb S, Franklin RJ, Gascon-Simorte JM, Calmiano M, Riche KL, Lallemand B, Keyaerts J, Edwards H, Maloney A, Delgado J, King L, Foley A, Lecomte F, Reuberson J, Meier C, Batchelor M, Bioorg Med Chem Lett. 2009 Mar 27. PMID:19369077

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (2wd1.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 2WD1 CSU: Contacts of Structural Units for 2WD1 Likely Quarternary Molecular Structure file(s) for 2WD1 Structure Factors (134 Kb) Retrieve 2WD1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WD1 from S2C, [Save to disk] Re-refined 2wd1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WD1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WD1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WD1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wd1_A] [2wd1] SWISS-PROT database: [P08581] Domain organization of [MET_HUMAN] by SWISSPFAM Domain found in 2WD1: [TyrKc ] by SMART

Other resources with information on 2WD1

Community annotation for 2WD1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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