2WG7	Hydrolase	date	Apr 16, 2009
title	Structure Of Oryza Sativa (Rice) Pla2
authors	J.E.Guy, U.Stahl, Y.Lindqvist
compound		source
Molecule: Putative Phospholipase A2 Chain: A, B Synonym: Pla2 Ec: 3.1.1.4 Engineered: Yes		Organism_scientific: Oryza Sativa Organism_common: Rice Organism_taxid: 4530 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tuner (De3)
symmetry	Space Group: P 62	R_factor 0.185 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.667 108.667 41.652 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CA, NA	enzyme	Hydrolase E.C.3.1.1.4 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of a class XIB Phospholipase A2: rice (Oryza sativa) isoform-2 PLA2 and an octanoate complex., Guy J, Stahl U, Lindqvist Y, J Biol Chem. 2009 May 20. PMID:19457861

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (2wg7.pdb1.gz) 21 Kb Biological Unit Coordinates (2wg7.pdb2.gz) 21 Kb LPC: Ligand-Protein Contacts for 2WG7 CSU: Contacts of Structural Units for 2WG7 Likely Quarternary Molecular Structure file(s) for 2WG7 Structure Factors (145 Kb) Retrieve 2WG7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WG7 from S2C, [Save to disk] Re-refined 2wg7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WG7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WG7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WG7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wg7] [2wg7_B] [2wg7_A] SWISS-PROT database: [Q9XG81] Domain organization of [PLA22_ORYSJ] by SWISSPFAM Domain found in 2WG7: [PA2c ] by SMART

Other resources with information on 2WG7

Community annotation for 2WG7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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