2WHI Ligase date May 05, 2009
title Crystal Structure Of Mycobacterium Tuberculosis Glutamine Sy In Complex With A Purine Analogue Inhibitor And L-Methionin Sulfoximine Phosphate.
authors M.T.Nilsson, W.W.Krajewski, T.A.Jones, S.L.Mowbray
compound source
Molecule: Glutamine Synthetase 1
Chain: A, B, C, D, E, F
Fragment: Residues 2-478
Synonym: Glutamate--Ammonia Ligase 1
Ec: 6.3.1.2
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83332
Strain: H37rv
Atcc: 25618
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Gj4745
Expression_system_plasmid: Ptrc99c
symmetry Space Group: C 2 2 21
R_factor 0.211 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
133.210 228.760 202.700 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 1AZ, 1PE, CL, MG, P3S, PO4 enzyme Ligase E.C.6.3.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructural Basis for the Inhibition of Mycobacterium tuberculosis Glutamine Synthetase by Novel ATP-Competitive Inhibitors., Nilsson MT, Krajewski WW, Yellagunda S, Prabhumurthy S, Chamarahally GN, Siddamadappa C, Srinivasa BR, Yahiaoui S, Larhed M, Karlen A, Jones TA, Mowbray SL, J Mol Biol. 2009 Aug 18. PMID:19695264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (491 Kb) [Save to disk]
  • Biological Unit Coordinates (2whi.pdb1.gz) 952 Kb
  • Biological Unit Coordinates (2whi.pdb2.gz) 480 Kb
  • LPC: Ligand-Protein Contacts for 2WHI
  • CSU: Contacts of Structural Units for 2WHI
  • Structure Factors (1285 Kb)
  • Retrieve 2WHI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WHI from S2C, [Save to disk]
  • Re-refined 2whi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WHI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WHI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WHI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2whi] [2whi_D] [2whi_A] [2whi_C] [2whi_F] [2whi_B] [2whi_E]
  • SWISS-PROT database: [P0A590]
  • Domain organization of [GLNA1_MYCTU] by SWISSPFAM
  • Domain found in 2WHI: [Gln-synt_C ] by SMART
  • Other resources with information on 2WHI
  • Community annotation for 2WHI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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