2WHZ Hydrolase Inhibitor date May 07, 2009
title Dipeptide Inhibitors Of Thermolysin
authors B.A.Lund, I.Leiros, H.K.S.Leiros
compound source
Molecule: Thermolysin
Chain: A
Synonym: Thermostable Neutral Proteinase
Ec: 3.4.24.27
Engineered: Yes
Other_details: The Di-Peptide Iy Is Bound To The Protein
 Organism_scientific: Bacillus Thermoproteolyticus
Organism_taxid: 1427
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.159 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.890 92.890 127.740 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.75 Å
ligand CA, ILE, PEG, TYR, ZN enzyme Hydrolase E.C.3.4.24.27 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (2whz.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 2WHZ
  • CSU: Contacts of Structural Units for 2WHZ
  • Structure Factors (1041 Kb)
  • Retrieve 2WHZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WHZ from S2C, [Save to disk]
  • Re-refined 2whz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2WHZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2WHZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WHZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2whz_A] [2whz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2WHZ
  • Community annotation for 2WHZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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