2WJ8	Rna Binding Protein Rna	date	May 25, 2009
title	Respiratory Syncitial Virus Ribonucleoprotein
authors	R.G.Tawar, S.Duquerroy, C.Vonrhein, P.F.Varela, L.Damier-Piolle, N.Castagne, K.Maclellan, H.Bedouelle, G.Bricogne, D.Bhella, J.El F.A.Rey
compound		source
Molecule: Nucleoprotein Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R Synonym: Protein N, Nucleocapsid Protein Engineered: Yes		Organism_scientific: Human Respiratory Syncytial Virus A St Long; Organism_taxid: 11260 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet-28b Expression_system_plasmid: Pet
Molecule: Rna (5'-R(Cpcpcpcpcpc)-3') Chain: a, b, c, d, e, f, g, h, I, j, k, l, m, n, o, p, q, r Other_details: Non Specific Rna From Cellular Origin Bound Nucleoprotein		Organism_scientific: Escherichia Coli Organism_taxid: 469008 Strain: Bl21(De3) Atcc: Baa-1025
symmetry	Space Group: C 1 2 1	R_factor 0.205 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 218.200 220.990 218.100 90.00 93.09 90.00
method	X-Ray Diffraction	resolution	3.29 Å
ligand	BO4	enzyme
Gene Ontology	Chain Function Process Component S, F, T, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G
Primary reference	Crystal structure of a nucleocapsid-like nucleoprotein-RNA complex of respiratory syncytial virus., Tawar RG, Duquerroy S, Vonrhein C, Varela PF, Damier-Piolle L, Castagne N, MacLellan K, Bedouelle H, Bricogne G, Bhella D, Eleouet JF, Rey FA, Science. 2009 Nov 27;326(5957):1279-83. PMID:19965480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1252 Kb) [Save to disk] Biological Unit Coordinates (2wj8.pdb1.gz) 628 Kb Biological Unit Coordinates (2wj8.pdb2.gz) 629 Kb LPC: Ligand-Protein Contacts for 2WJ8 CSU: Contacts of Structural Units for 2WJ8 Structure Factors (2332 Kb) Retrieve 2WJ8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WJ8 from S2C, [Save to disk] Re-refined 2wj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WJ8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WJ8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WJ8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wj8_Q] [2wj8_a] [2wj8_T] [2wj8_S] [2wj8] [2wj8_k] [2wj8_K] [2wj8_m] [2wj8_F] [2wj8_r] [2wj8_q] [2wj8_t] [2wj8_L] [2wj8_J] [2wj8_M] [2wj8_f] [2wj8_g] [2wj8_b] [2wj8_O] [2wj8_j] [2wj8_n] [2wj8_h] [2wj8_c] [2wj8_R] [2wj8_B] [2wj8_C] [2wj8_A] [2wj8_D] [2wj8_i] [2wj8_G] [2wj8_l] [2wj8_P] [2wj8_d] [2wj8_p] [2wj8_I] [2wj8_s] [2wj8_e] [2wj8_o] [2wj8_N] [2wj8_E] [2wj8_H] SWISS-PROT database: [P03418] Domain organization of [NCAP_HRSVA] by SWISSPFAM

Other resources with information on 2WJ8

Community annotation for 2WJ8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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