2WMR Transferase date Jul 03, 2009
title Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex W Inhibitors
authors T.P.Matthews, S.Klair, S.Burns, K.Boxall, M.Cherry, M.Fisher, I.M. M.I.Walton, T.Mchardy, K.M.J.Cheung, R.Van Montfort, D.William G.W.Aherne, M.D.Garrett, J.Reader, I.Collins
compound source
Molecule: Serinethreonine-Protein Kinase Chk1
Chain: A
Fragment: Kinase Domain, Residues 1-289
Synonym: Checkpoint Kinase 1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor 0.208 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.780 65.250 54.240 90.00 101.89 90.00
method X-Ray Diffractionresolution 2.43 Å
ligand ZYR BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification of inhibitors of checkpoint kinase 1 through template screening., Matthews TP, Klair S, Burns S, Boxall K, Cherry M, Fisher M, Westwood IM, Walton MI, McHardy T, Cheung KM, Van Montfort R, Williams D, Aherne GW, Garrett MD, Reader J, Collins I, J Med Chem. 2009 Aug 13;52(15):4810-9. PMID:19572549
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (2wmr.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 2WMR
  • CSU: Contacts of Structural Units for 2WMR
  • Likely Quarternary Molecular Structure file(s) for 2WMR
  • Structure Factors (577 Kb)
  • Retrieve 2WMR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WMR from S2C, [Save to disk]
  • Re-refined 2wmr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WMR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WMR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WMR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wmr] [2wmr_A]
  • SWISS-PROT database: [O14757]
  • Domain organization of [CHK1_HUMAN] by SWISSPFAM
  • Domain found in 2WMR: [S_TKc ] by SMART
  • Other resources with information on 2WMR
  • Community annotation for 2WMR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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