2WMS Transferase date Jul 03, 2009
title Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex W Inhibitors
authors T.P.Matthews, S.Klair, S.Burns, K.Boxall, M.Cherry, M.Fisher, I.M. M.I.Walton, T.Mchardy, K.M.J.Cheung, R.Van Montfort, D.William G.W.Aherne, M.D.Garrett, J.Reader, I.Collins
compound source
Molecule: Serinethreonine-Protein Kinase Chk1
Chain: A
Fragment: Kinase Domain, Residues 1-289
Synonym: Checkpoint Kinase 1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor 0.223 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.730 65.270 54.170 90.00 101.68 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ZYS enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification of inhibitors of checkpoint kinase 1 through template screening., Matthews TP, Klair S, Burns S, Boxall K, Cherry M, Fisher M, Westwood IM, Walton MI, McHardy T, Cheung KM, Van Montfort R, Williams D, Aherne GW, Garrett MD, Reader J, Collins I, J Med Chem. 2009 Aug 13;52(15):4810-9. PMID:19572549
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (2wms.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 2WMS
  • CSU: Contacts of Structural Units for 2WMS
  • Likely Quarternary Molecular Structure file(s) for 2WMS
  • Structure Factors (377 Kb)
  • Retrieve 2WMS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WMS from S2C, [Save to disk]
  • Re-refined 2wms structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WMS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WMS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WMS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wms_A] [2wms]
  • SWISS-PROT database: [O14757]
  • Domain organization of [CHK1_HUMAN] by SWISSPFAM
  • Domain found in 2WMS: [S_TKc ] by SMART
  • Other resources with information on 2WMS
  • Community annotation for 2WMS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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