2WQO	Transferase	date	Aug 24, 2009
title	Structure Of Nek2 Bound To The Aminopyridine Cct241950
authors	C.Mas-Droux, R.Bayliss
compound		source
Molecule: Serinethreonine-Protein Kinase Nek2 Chain: A Fragment: Catalytic Domain, Residues 1-271 Ec: 2.7.11.1 Engineered: Yes Synonym Nima-Related Protein Kinase 2, Nima-Like Protein Kinase 1, Hspk 21, Nek2		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Codonplus Rpil Expression_system_plasmid: Pet30
symmetry	Space Group: C 1 2 1	R_factor 0.1833 R_Free 0.2350
crystal cell	length a length b length c angle alpha angle beta angle gamma 100.430 56.840 73.490 90.00 128.09 90.00
method	X-Ray Diffraction	resolution	2.17 Å
ligand	CL, VGK	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	An autoinhibitory tyrosine motif in the cell-cycle-regulated Nek7 kinase is released through binding of Nek9., Richards MW, O'Regan L, Mas-Droux C, Blot JM, Cheung J, Hoelder S, Fry AM, Bayliss R, Mol Cell. 2009 Nov 25;36(4):560-70. PMID:19941817

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (2wqo.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 2WQO CSU: Contacts of Structural Units for 2WQO Structure Factors (403 Kb) Retrieve 2WQO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WQO from S2C, [Save to disk] Re-refined 2wqo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WQO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WQO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WQO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wqo] [2wqo_A] SWISS-PROT database: [P51955] Domain organization of [NEK2_HUMAN] by SWISSPFAM Domain found in 2WQO: [S_TKc ] by SMART

Other resources with information on 2WQO

Community annotation for 2WQO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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