2WSI Transferase date Sep 07, 2009
title Crystal Structure Of Yeast Fad Synthetase (Fad1) In Complex With Fad
authors N.Leulliot, H.Van Tilbeurgh
compound source
Molecule: Fad Synthetase
Chain: A
Synonym: Fmn Adenylyltransferase, Fad Pyrophosphorylase, Flavin Adenine Dinucleotide Synthetase;
Ec: 2.7.7.2
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta
Expression_system_vector: Pet9
symmetry Space Group: C 1 2 1
R_factor 0.1740 R_Free 0.2312
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.871 36.861 79.231 90.00 92.35 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand FAD, SO4 enzyme Transferase E.C.2.7.7.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of yeast FAD synthetase (Fad1) in complex with FAD., Leulliot N, Blondeau K, Keller J, Ulryck N, Quevillon-Cheruel S, van Tilbeurgh H, J Mol Biol. 2010 May 21;398(5):641-6. Epub 2010 Mar 30. PMID:20359485
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2wsi.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 2WSI
  • CSU: Contacts of Structural Units for 2WSI
  • Structure Factors (1141 Kb)
  • Retrieve 2WSI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WSI from S2C, [Save to disk]
  • Re-refined 2wsi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WSI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WSI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WSI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wsi_A] [2wsi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2WSI
  • Community annotation for 2WSI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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