2WU6 Transferase date Sep 30, 2009
title Crystal Structure Of The Human Clk3 In Complex With Dki
authors J.R.C.Muniz, O.Fedorov, O.King, P.Filippakopoulos, A.N.Bullock, C T.Heightman, E.Ugochukwu, F.Von Delft, C.H.Arrowsmith, A.M.Edwa J.Weigelt, C.Bountra, S.Knapp
compound source
Molecule: Dual Specificity Protein Kinase Clk3
Chain: A
Fragment: Residues 127-484
Synonym: Cdc-Like Kinase 3, Cdc-Like Kinase 3 Isoform Hclk3
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Muscle
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3
symmetry Space Group: C 1 2 1
R_factor 0.17000 R_Free 0.21137
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.150 62.330 74.150 90.00 96.04 90.00
method X-Ray Diffractionresolution 1.92 Å
ligand CL, DKI, DMS, EDO, SO4 enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSpecific CLK inhibitors from a novel chemotype for regulation of alternative splicing., Fedorov O, Huber K, Eisenreich A, Filippakopoulos P, King O, Bullock AN, Szklarczyk D, Jensen LJ, Fabbro D, Trappe J, Rauch U, Bracher F, Knapp S, Chem Biol. 2011 Jan 28;18(1):67-76. PMID:21276940
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (2wu6.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 2WU6
  • CSU: Contacts of Structural Units for 2WU6
  • Structure Factors (416 Kb)
  • Retrieve 2WU6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WU6 from S2C, [Save to disk]
  • Re-refined 2wu6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WU6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WU6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WU6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wu6_A] [2wu6]
  • SWISS-PROT database: [P49761]
  • Domain organization of [CLK3_HUMAN] by SWISSPFAM
  • Domain found in 2WU6: [S_TKc ] by SMART
  • Other resources with information on 2WU6
  • Community annotation for 2WU6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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