2WU7 Transferase date Sep 30, 2009
title Crystal Structure Of The Human Clk3 In Complex With V25
authors J.R.C.Muniz, O.Fedorov, O.King, P.Filippakopoulos, A.N.Bullock, C.Phillips, T.Heightman, E.Ugochukwu, F.Von Delft, C.H.Arrowsmith, F.Bracher, K.Huber, A.M.Edwards, J.Weigelt, C.Bountra, S.Knapp
compound source
Molecule: Dual Specificity Protein Kinase Clk3
Chain: A
Fragment: Residues 127-484
Synonym: Cdc-Like Kinase 3, Cdc-Like Kinase 3 Isoform Hclk3;
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Muscle
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3
symmetry Space Group: C 1 2 1
R_factor 0.1904 R_Free 0.2456
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.870 62.200 75.370 90.00 97.97 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand CL, SO4, V25 enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSpecific CLK inhibitors from a novel chemotype for regulation of alternative splicing., Fedorov O, Huber K, Eisenreich A, Filippakopoulos P, King O, Bullock AN, Szklarczyk D, Jensen LJ, Fabbro D, Trappe J, Rauch U, Bracher F, Knapp S, Chem Biol. 2011 Jan 28;18(1):67-76. PMID:21276940
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (2wu7.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 2WU7
  • CSU: Contacts of Structural Units for 2WU7
  • Structure Factors (266 Kb)
  • Retrieve 2WU7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WU7 from S2C, [Save to disk]
  • Re-refined 2wu7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WU7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WU7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WU7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wu7_A] [2wu7]
  • SWISS-PROT database: [P49761]
  • Domain organization of [CLK3_HUMAN] by SWISSPFAM
  • Domain found in 2WU7: [S_TKc ] by SMART
  • Other resources with information on 2WU7
  • Community annotation for 2WU7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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