2WU9 Transferase date Oct 01, 2009
title Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thali
authors V.E.Pye, C.E.Christensen, J.H.Dyer, S.Arent, A.Henriksen
compound source
Molecule: 3-Ketoacyl-Coa Thiolase 2, Peroxisomal
Chain: A, B
Fragment: Residues 36-462
Synonym: Beta-Ketothiolase 2, Acetyl-Coa Acyltransferase 2, Peroxisomal 3-Oxoacyl-Coa Thiolase 2, Peroxisome Defective 1\,3-Ketoacyl-Coa Thiolase;
Ec: 2.3.1.16
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale Cress
Organism_taxid: 3702
Atcc: 77500
Organelle: Peroxisome
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Pet46 Eklic
Expression_system_variant: Rosettagami2(De3)
symmetry Space Group: P 1 21 1
R_factor 0.150 R_Free 0.178
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.831 86.670 72.750 90.00 106.71 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand EDO enzyme Transferase E.C.2.3.1.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePeroxisomal plant 3-ketoacyl-coa thiolases structure and activity are regulated by a sensitive redox switch., Pye VE, Christensen CE, Dyer JH, Arent S, Henriksen A, J Biol Chem. 2010 May 12. PMID:20463027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (2wu9.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 2WU9
  • CSU: Contacts of Structural Units for 2WU9
  • Structure Factors (1529 Kb)
  • Retrieve 2WU9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WU9 from S2C, [Save to disk]
  • Re-refined 2wu9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WU9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WU9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WU9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wu9_A] [2wu9_B] [2wu9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2WU9
  • Community annotation for 2WU9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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