2WYI	Hydrolase	date	Nov 16, 2009
title	Structure Of The Streptococcus Pyogenes Family Gh38 Alpha-Ma Complexed With Swainsonine
authors	M.D.L.Suits, Y.Zhu, E.J.Taylor, D.L.Zechel, H.J.Gilbert, G.J.Davi
compound		source
Molecule: Alpha-Mannosidase Chain: A, B Synonym: Alpha-Mannosidase II Ec: 3.2.1.24 Engineered: Yes		Organism_scientific: Streptococcus Pyogenes Organism_taxid: 160490 Strain: M1 Gas Atcc: 700294 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: P 43 21 2	R_factor 0.187 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 178.680 178.680 198.237 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	PG0, SWA, ZN	enzyme	Hydrolase E.C.3.2.1.24 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure and Kinetic Investigation of Streptococcus pyogenes Family GH38 alpha-Mannosidase., Suits MD, Zhu Y, Taylor EJ, Walton J, Zechel DL, Gilbert HJ, Davies GJ, PLoS One. 2010 Feb 3;5(2):e9006. PMID:20140249

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (296 Kb) [Save to disk] Biological Unit Coordinates (2wyi.pdb1.gz) 289 Kb LPC: Ligand-Protein Contacts for 2WYI CSU: Contacts of Structural Units for 2WYI Structure Factors (736 Kb) Retrieve 2WYI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WYI from S2C, [Save to disk] Re-refined 2wyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 2WYI

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WYI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wyi_A] [2wyi] [2wyi_B] SWISS-PROT database: [Q99YP5] Domain organization of [Q99YP5_STRP1] by SWISSPFAM Domain found in 2WYI: [Alpha-mann_mid ] by SMART

Other resources with information on 2WYI

Community annotation for 2WYI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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