2X5V	Photosynthesis	date	Feb 10, 2010
title	80 Microsecond Laue Diffraction Snapshot From Crystals Of A Photosynthetic Reaction Centre 3 Millisecond Following Photoactivation.
authors	A.B.Wohri, G.Katona, L.C.Johansson, E.Fritz, E.Malmerberg, M.Ande J.Vincent, M.Eklund, M.Cammarata, M.Wulff, J.Davidsson, G.Groenh R.Neutze
compound		source
Molecule: Photosynthetic Reaction Center Cytochrome C Subun Chain: C Synonym: Cytochrome C558c559		Organism_scientific: Blastochloris Viridis Organism_taxid: 1079 Atcc: 19567 Other_details: Deutsche Sammlung Von Mikroorganismen Und Zellkulturen Gmbh (Dsmz);
Molecule: Reaction Center Protein H Chain Chain: H Synonym: Photosynthetic Reaction Center H Subunit		Organism_scientific: Blastochloris Viridis Organism_taxid: 1079 Atcc: 19567 Other_details: Deutsche Sammlung Von Mikroorganismen Und Zellkulturen Gmbh (Dsmz);
Molecule: Reaction Center Protein L Chain Chain: L Synonym: Photosynthetic Reaction Center L Subunit		Organism_scientific: Blastochloris Viridis Organism_taxid: 1079 Atcc: 19567 Other_details: Deutsche Sammlung Von Mikroorganismen Und Zellkulturen Gmbh (Dsmz);
Molecule: Reaction Center Protein M Chain Chain: M Synonym: Photosynthetic Reaction Center M Subunit		Organism_scientific: Blastochloris Viridis Organism_taxid: 1079 Atcc: 19567 Other_details: Deutsche Sammlung Von Mikroorganismen Und Zellkulturen Gmbh (Dsmz)
symmetry	Space Group: P 21 21 2	R_factor 0.277 R_Free 0.319
crystal cell	length a length b length c angle alpha angle beta angle gamma 85.693 143.470 177.998 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	BCB, BPB, FE2, FME, HEC, MQ7	enzyme
Gene Ontology	Chain Function Process Component C electron transfer activity H electron transporter, transf... L M
Primary reference	Light-induced structural changes in a photosynthetic reaction center caught by Laue diffraction., Wohri AB, Katona G, Johansson LC, Fritz E, Malmerberg E, Andersson M, Vincent J, Eklund M, Cammarata M, Wulff M, Davidsson J, Groenhof G, Neutze R, Science. 2010 Apr 30;328(5978):630-3. PMID:20431017

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk] Biological Unit Coordinates (2x5v.pdb1.gz) 193 Kb LPC: Ligand-Protein Contacts for 2X5V CSU: Contacts of Structural Units for 2X5V Structure Factors (745 Kb) Retrieve 2X5V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2X5V from S2C, [Save to disk] Re-refined 2x5v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2X5V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2X5V

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2X5V, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2x5v] [2x5v_C] [2x5v_L] [2x5v_M] [2x5v_H] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2X5V

Community annotation for 2X5V at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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