2X7B Transferase date Feb 25, 2010
title Crystal Structure Of The N-Terminal Acetylase Ard1 From Sulf Solfataricus P2
authors M.Oke, L.G.Carter, K.A.Johnson, H.Liu, S.A.Mcmahon, D.Mackay, M.F. G.L.Taylor, J.H.Naismith
compound source
Molecule: N-Acetyltransferase Sso0209
Chain: A
Ec: 2.3.1.-
Engineered: Yes
Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 273057
Strain: P2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest14
symmetry Space Group: C 1 2 1
R_factor 0.200 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.440 34.610 49.830 90.00 98.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand CL, COA enzyme Transferase E.C.2.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Scottish Structural Proteomics Facility: targets, methods and outputs., Oke M, Carter LG, Johnson KA, Liu H, McMahon SA, Yan X, Kerou M, Weikart ND, Kadi N, Sheikh MA, Schmelz S, Dorward M, Zawadzki M, Cozens C, Falconer H, Powers H, Overton IM, van Niekerk CA, Peng X, Patel P, Garrett RA, Prangishvili D, Botting CH, Coote PJ, Dryden DT, Barton GJ, Schwarz-Linek U, Challis GL, Taylor GL, White MF, Naismith JH, J Struct Funct Genomics. 2010 Jun;11(2):167-80. Epub 2010 Apr 24. PMID:20419351
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2x7b.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 2X7B
  • CSU: Contacts of Structural Units for 2X7B
  • Structure Factors (88 Kb)
  • Retrieve 2X7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X7B from S2C, [Save to disk]
  • Re-refined 2x7b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2X7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2X7B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X7B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x7b_A] [2x7b]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2X7B
  • Community annotation for 2X7B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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