2XEY Transferase date May 19, 2010
title Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex W Inhibitors
authors T.P.Matthews, T.Mchardy, S.Klair, K.Boxall, M.Fisher, M.Cherry, C. G.J.Addison, J.Ellard, G.W.Aherne, I.M.Westwood, R.Van Montfort M.D.Garrett, J.C.Reader, I.Collins
compound source
Molecule: Serinethreonine-Protein Kinase Chk1
Chain: A
Fragment: Kinase Domain, Residues 1-289
Synonym: Checkpoint Kinase 1, Chek1, Chk1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
symmetry Space Group: P 1 21 1
R_factor 0.219 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.970 65.660 57.960 90.00 93.91 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand YVQ BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign and evaluation of 3,6-di(hetero)aryl imidazo[1,2-a]pyrazines as inhibitors of checkpoint and other kinases., Matthews TP, McHardy T, Klair S, Boxall K, Fisher M, Cherry M, Allen CE, Addison GJ, Ellard J, Aherne GW, Westwood IM, Montfort RV, Garrett MD, Reader JC, Collins I, Bioorg Med Chem Lett. 2010 May 27. PMID:20561787
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (2xey.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 2XEY
  • CSU: Contacts of Structural Units for 2XEY
  • Structure Factors (475 Kb)
  • Retrieve 2XEY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XEY from S2C, [Save to disk]
  • Re-refined 2xey structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XEY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XEY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XEY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xey_A] [2xey]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XEY: [S_TKc ] by SMART
  • Other resources with information on 2XEY
  • Community annotation for 2XEY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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