2XMY Transferase date Jul 29, 2010
title Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional Cdk Inhibitors As Anticancer Age
authors S.Wang, G.Griffiths, C.A.Midgley, A.L.Barnett, M.Cooper, J.Grabar L.Ingram, W.Jackson, G.Kontopidis, S.J.Mcclue, C.Mcinnes, J.Mcla C.Meades, M.Mezna, I.Stuart, M.P.Thomas, D.I.Zheleva, D.P.Lane, R.C.Jackson, D.M.Glover, D.G.Blake, P.M.Fischer
compound source
Molecule: Cell Division Protein Kinase 2
Chain: A
Synonym: P33 Protein Kinase
Ec: 2.7.1.37, 2.7.11.22
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.189 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.118 71.498 71.642 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CDK BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery and characterization of 2-anilino-4- (thiazol-5-yl)pyrimidine transcriptional CDK inhibitors as anticancer agents., Wang S, Griffiths G, Midgley CA, Barnett AL, Cooper M, Grabarek J, Ingram L, Jackson W, Kontopidis G, McClue SJ, McInnes C, McLachlan J, Meades C, Mezna M, Stuart I, Thomas MP, Zheleva DI, Lane DP, Jackson RC, Glover DM, Blake DG, Fischer PM, Chem Biol. 2010 Oct 29;17(10):1111-21. PMID:21035734
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2xmy.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 2XMY
  • CSU: Contacts of Structural Units for 2XMY
  • Structure Factors (272 Kb)
  • Retrieve 2XMY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XMY from S2C, [Save to disk]
  • Re-refined 2xmy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XMY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XMY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XMY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xmy] [2xmy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XMY: [S_TKc ] by SMART
  • Other resources with information on 2XMY
  • Community annotation for 2XMY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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