2XNG Transferase date Aug 02, 2010
title Structure Of Aurora-A Bound To A Selective Imidazopyrazine I
authors M.Kosmopoulou, R.Bayliss
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Catalytic Domain, Residues 122-392
Synonym: Aurora Kinase A, Serinethreonine-Protein Kinase A Serinethreonine-Protein Kinase 15, Auroraipl1-Related Kin Breast Tumor-Amplified Kinase, Aurora-Related Kinase 1, Ark
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.221 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.096 82.096 171.628 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.61 Å
ligand A0H enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-based design of imidazo[1,2-a]pyrazine derivatives as selective inhibitors of Aurora-A kinase in cells., Bouloc N, Large JM, Kosmopoulou M, Sun C, Faisal A, Matteucci M, Reynisson J, Brown N, Atrash B, Blagg J, McDonald E, Linardopoulos S, Bayliss R, Bavetsias V, Bioorg Med Chem Lett. 2010 Oct 15;20(20):5988-93. Epub 2010 Aug 21. PMID:20833547
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2xng.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2XNG
  • CSU: Contacts of Structural Units for 2XNG
  • Structure Factors (184 Kb)
  • Retrieve 2XNG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XNG from S2C, [Save to disk]
  • Re-refined 2xng structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XNG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XNG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XNG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xng_A] [2xng]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XNG: [S_TKc ] by SMART
  • Other resources with information on 2XNG
  • Community annotation for 2XNG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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