2XRU Transferase date Sep 22, 2010
title Aurora-A T288e Complexed With Pha-828300
authors S.Bindi, D.Fancelli, C.Alli, D.Berta, J.A.Bertrand, A.D.Cameron, P.Cappella, P.Carpinelli, G.Cervi, W.Croci, M.D'Anello, B.Forte, M.Lauragiorgini, A.Marsiglio, J.Moll, E.Pesenti, V.Pittala, M.Pu F.Riccardi-Sirtori, F.Roletto, C.Soncini, P.Storici, M.Varasi, D P.Zugnoni, P.Vianello
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Catalytic Domain, Residues 126-403
Synonym: Aurora Kinase A, Serinethreonine Kinase 15, Auror Related Kinase 1, Breast Tumor-Amplified Kinase, Aurora-A, Related Kinase 1, Hark1;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: High Five
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 61 2 2
R_factor 0.247 R_Free 0.344
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.467 82.467 165.453 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand 400 BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThieno[3,2-c]pyrazoles: a novel class of Aurora inhibitors with favorable antitumor activity., Bindi S, Fancelli D, Alli C, Berta D, Bertrand JA, Cameron AD, Cappella P, Carpinelli P, Cervi G, Croci V, D'Anello M, Forte B, Giorgini ML, Marsiglio A, Moll J, Pesenti E, Pittala V, Pulici M, Riccardi-Sirtori F, Roletto F, Soncini C, Storici P, Varasi M, Volpi D, Zugnoni P, Vianello P, Bioorg Med Chem. 2010 Oct 1;18(19):7113-20. Epub 2010 Jul 25. PMID:20817473
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2xru.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2XRU
  • CSU: Contacts of Structural Units for 2XRU
  • Structure Factors (54 Kb)
  • Retrieve 2XRU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XRU from S2C, [Save to disk]
  • Re-refined 2xru structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XRU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XRU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XRU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xru_A] [2xru]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XRU: [S_TKc ] by SMART
  • Other resources with information on 2XRU
  • Community annotation for 2XRU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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