2XRW	Transcription	date	Sep 23, 2010
title	Linear Binding Motifs For Jnk And For Calcineurin Antagonist Control The Nuclear Shuttling Of Nfat4
authors	T.Barkai, I.Toeoroe, A.Garai, A.Remenyi
compound		source
Molecule: Mitogen-Activated Protein Kinase 8 Chain: A Fragment: Residues 2-364 Synonym: Jnk1, Mitogen-Activated Protein Kinase 8 Isoform J Mitogen-Activated Protein Kinase 8\,Isoform Cra_d, Cdna Flj Highly Similar To Homo Sapiens Mitogen-Activated Protein Ki (Mapk8)\,Transcript Variant 4\,Mrna; Ec: 2.7.11.24 Engineered: Yes Other_details: Last 20 Residues Truncated		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pet Derivative
Molecule: Nuclear Factor Of Activated T-Cells\, Cytoplasmic Chain: B Fragment: Fragment Of Nfat4, Residues 141-154 Synonym: Pepnfat4, Nf-Atc3, Nfatc3, T-Cell Transcription Fa Nfat4, Nf-At4, Nfatx; Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.165 R_Free 0.187
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.230 94.130 47.840 90.00 110.74 90.00
method	X-Ray Diffraction	resolution	1.33 Å
ligand	ANP, GOL	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove., Garai A, Zeke A, Gogl G, Toro I, Fordos F, Blankenburg H, Barkai T, Varga J, Alexa A, Emig D, Albrecht M, Remenyi A, Sci Signal. 2012 Oct 9;5(245):ra74. doi: 10.1126/scisignal.2003004. PMID:23047924

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk] Biological Unit Coordinates (2xrw.pdb1.gz) 127 Kb LPC: Ligand-Protein Contacts for 2XRW CSU: Contacts of Structural Units for 2XRW Structure Factors (577 Kb) Retrieve 2XRW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XRW from S2C, [Save to disk] Re-refined 2xrw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XRW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XRW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XRW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xrw] [2xrw_A] [2xrw_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XRW: [S_TKc ] by SMART

Other resources with information on 2XRW

Community annotation for 2XRW at PDBWiki (http://pdbwiki.org)

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