2XYW	Transcription	date	Nov 19, 2010
title	Novel Sulfonylthiadiazoles With An Unusual Binding Mode As P Dual Peroxisome Proliferator-Activated Receptor (Ppar) Gamm Agonists With High Potency And In-Vivo Efficacy
authors	J.P.Marquette, M.Mathieu
compound		source
Molecule: Peroxisome Proliferator-Activated Receptor Delta Chain: A, B Fragment: Ligand Binding Domain, Residues 165-441 Synonym: Nuci, Nuclear Hormone Receptor 1, Nuclear Receptor Group C Member 2, Peroxisome Proliferator-Activated Recep Ppar-Delta, Nuc1, Ppar-Beta; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: P 1 21 1	R_factor 0.188 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.368 93.218 97.473 90.00 97.31 90.00
method	X-Ray Diffraction	resolution	3.14 Å
ligand	08S, BOG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Sulfonylthiadiazoles with an unusual binding mode as partial dual peroxisome proliferator-activated receptor (PPAR) gamma/delta agonists with high potency and in vivo efficacy., Keil S, Matter H, Schonafinger K, Glien M, Mathieu M, Marquette JP, Michot N, Haag-Diergarten S, Urmann M, Wendler W, ChemMedChem. 2011 Apr 4;6(4):633-53. doi: 10.1002/cmdc.201100047. Epub, 2011 Mar 11. PMID:21400663

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (2xyw.pdb1.gz) 45 Kb Biological Unit Coordinates (2xyw.pdb2.gz) 45 Kb LPC: Ligand-Protein Contacts for 2XYW CSU: Contacts of Structural Units for 2XYW Structure Factors (91 Kb) Retrieve 2XYW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XYW from S2C, [Save to disk] Re-refined 2xyw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XYW in 3D

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Visual 3D analysis of 2XYW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XYW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xyw] [2xyw_B] [2xyw_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XYW: [HOLI ] by SMART

Other resources with information on 2XYW

Community annotation for 2XYW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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