2Y9X	Oxidoreductase	date	Feb 17, 2011
title	Crystal Structure Of Ppo3, A Tyrosinase From Agaricus Bispor Deoxy-Form That Contains Additional Unknown Lectin-Like Sub Inhibitor Tropolone
authors	W.T.Ismaya, H.J.Rozeboom, A.Weijn, J.J.Mes, F.Fusetti, H.J.Wicher B.W.Dijkstra
compound		source
Molecule: Polyphenol Oxidase Chain: A, B, C, D Fragment: Residues 2-392 Synonym: Tyrosinase Ec: 1.14.18.1 Other_details: Thioether Bond Between His85 And Cys83		Organism_scientific: Agaricus Bisporus Organism_common: Common Mushroom Organism_taxid: 5341 Other_details: Commercial
Molecule: Lectin-Like Fold Protein Chain: E, F, G, H		Organism_scientific: Agaricus Bisporus Organism_common: Common Mushroom Organism_taxid: 5341 Other_details: Commercial
symmetry	Space Group: P 1 21 1	R_factor 0.235 R_Free 0.289
crystal cell	length a length b length c angle alpha angle beta angle gamma 103.840 104.820 119.360 90.00 110.45 90.00
method	X-Ray Diffraction	resolution	2.78 Å
ligand	0TR, CU, HO	enzyme	Oxidoreductase E.C.1.14.18.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal Structure of Agaricus bisporus Mushroom Tyrosinase: Identity of the Tetramer Subunits and Interaction with Tropolone., Ismaya WT, Rozeboom HJ, Weijn A, Mes JJ, Fusetti F, Wichers HJ, Dijkstra BW, Biochemistry. 2011 Jun 21;50(24):5477-5486. Epub 2011 May 27. PMID:21598903

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (693 Kb) [Save to disk] Biological Unit Coordinates (2y9x.pdb1.gz) 174 Kb Biological Unit Coordinates (2y9x.pdb2.gz) 175 Kb Biological Unit Coordinates (2y9x.pdb3.gz) 176 Kb Biological Unit Coordinates (2y9x.pdb4.gz) 175 Kb LPC: Ligand-Protein Contacts for 2Y9X CSU: Contacts of Structural Units for 2Y9X Structure Factors (2778 Kb) Retrieve 2Y9X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y9X from S2C, [Save to disk] Re-refined 2y9x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y9X in 3D

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Visual 3D analysis of 2Y9X

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2Y9X, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y9x] [2y9x_H] [2y9x_E] [2y9x_F] [2y9x_C] [2y9x_A] [2y9x_D] [2y9x_B] [2y9x_G] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2Y9X

Community annotation for 2Y9X at PDBWiki (http://pdbwiki.org)

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