2YEU	Hydrolase	date	Mar 30, 2011
title	Structural And Functional Insights Of Dr2231 Protein, The Ma Nucleoside Triphosphate Pyrophosphohydrolase From Deinococc Radiodurans, Complex With Gd
authors	A.M.D.Goncalves, D.De Sanctis, S.M.Mcsweeney
compound		source
Molecule: Dr2231 Chain: A, B, C, D, E, F Ec: 3.6.1.19 Engineered: Yes		Organism_scientific: Deinococcus Radiodurans Organism_taxid: 243230 Strain: R1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet151d-Topo
symmetry	Space Group: P 21 21 21	R_factor 0.18787 R_Free 0.23150
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.820 110.750 165.980 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	GD, GOL, SO4	enzyme	Hydrolase E.C.3.6.1.19 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structural and Functional Insights into DR2231 Protein, the MazG-like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus radiodurans., Goncalves AM, de Sanctis D, McSweeney SM, J Biol Chem. 2011 Sep 2;286(35):30691-705. Epub 2011 Jul 6. PMID:21733847

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (453 Kb) [Save to disk] Biological Unit Coordinates (2yeu.pdb1.gz) 150 Kb Biological Unit Coordinates (2yeu.pdb2.gz) 151 Kb Biological Unit Coordinates (2yeu.pdb3.gz) 147 Kb LPC: Ligand-Protein Contacts for 2YEU CSU: Contacts of Structural Units for 2YEU Structure Factors (1121 Kb) Retrieve 2YEU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YEU from S2C, [Save to disk] Re-refined 2yeu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YEU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2YEU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YEU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yeu_E] [2yeu_D] [2yeu_F] [2yeu_B] [2yeu] [2yeu_C] [2yeu_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2YEU

Community annotation for 2YEU at PDBWiki (http://pdbwiki.org)

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