2YIX	Transferase	date	May 17, 2011
title	Triazolopyridine Inhibitors Of P38
authors	D.S.Millan, M.Anderson, M.E.Bunnage, J.L.Burrows, K.J.Butcher, P. T.J.Evans, D.A.Fairman, S.Han, S.J.Hughes, S.L.Irving, I.C.Kilty A.Lemaitre, R.A.Lewthawaite, A.Mahke, E.Marr, J.P.Mathias, J.Phi C.Phillips, R.T.Smith, M.H.Stefaniak, M.Yeadon
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Fragment: Residues 4-354 Synonym: P38 Kinase, Map Kinase 14, Mapk 14, Cytokine Suppr Anti-Inflammatory Drug-Binding Protein, Csaid-Binding Prot Csbp, Map Kinase Mxi2, Max-Interacting Protein 2, Mitogen-Activated Protein Kinase P38 Alpha, Map Kinase P38 Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.1932 R_Free 0.2472
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.944 86.523 122.580 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	YIX BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Design and Synthesis of Inhaled p38 Inhibitors for the Treatment of Chronic Obstructive Pulmonary Disease., Millan DS, Bunnage ME, Burrows JL, Butcher KJ, Dodd PG, Evans TJ, Fairman DA, Hughes SJ, Kilty IC, Lemaitre A, Lewthwaite RA, Mahnke A, Mathias JP, Philip J, Smith RT, Stefaniak MH, Yeadon M, Phillips C, J Med Chem. 2011 Nov 24;54(22):7797-814. Epub 2011 Oct 28. PMID:21888439

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (2yix.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 2YIX CSU: Contacts of Structural Units for 2YIX Structure Factors (413 Kb) Retrieve 2YIX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YIX from S2C, [Save to disk] Re-refined 2yix structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YIX in 3D

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Visual 3D analysis of 2YIX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YIX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yix] [2yix_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2YIX: [S_TKc ] by SMART

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Community annotation for 2YIX at PDBWiki (http://pdbwiki.org)

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