2YT2 Signaling Protein date Apr 05, 2007
title Solution Structure Of The Chimera Of The Ptb Domain Of Snt-2 Residue Peptide (Aa 1571-1589) Of Halk
authors H.Li, S.Koshiba, T.Tomizawa, S.Watanabe, T.Harada, T.Kigawa, S.Yok Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Fibroblast Growth Factor Receptor Substrate 3 And Tyrosine Kinase Receptor;
Chain: A
Fragment: Ptb Domain And 19-Residue Peptide
Synonym: Fgfr Substrate 3, Suc1-Associated Neurotrophic Fac 2, Snt-2, Fgfr-Signaling Adaptor Snt2;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060724-01
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Primary referenceStructural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2., Koshiba S, Li H, Motoda Y, Tomizawa T, Kasai T, Tochio N, Yabuki T, Harada T, Watanabe S, Tanaka A, Shirouzu M, Kigawa T, Yamamoto T, Yokoyama S, J Struct Funct Genomics. 2010 May 8. PMID:20454865
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (778 Kb) [Save to disk]
  • Biological Unit Coordinates (2yt2.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2YT2
  • Retrieve 2YT2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YT2 from S2C, [Save to disk]
    • View 2YT2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2YT2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2YT2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yt2_A] [2yt2]
  • SWISS-PROT database: [Q9UM73] [O43559]
  • Domain organization of [ALK_HUMAN] [FRS3_HUMAN] by SWISSPFAM
  • Domains found in 2YT2: [IRS] [PTBI ] by SMART
    • Other resources with information on 2YT2
  • Community annotation for 2YT2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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