2YZ2 Hydrolase date May 02, 2007
title Crystal Structure Of The Abc Transporter In The Cobalt Trans System
authors A.S.Ethayathullah, Y.Bessho, B.Padmanabhan, T.P.Singh, P.Kaur, S. Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Putative Abc Transporter Atp-Binding Protein Tm_0
Chain: A, B
Synonym: Putative Cobalt Import Atp-Binding Protein Cbio 1
Ec: 3.6.3.-
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 243274
Strain: Msb8
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus (De3)-Ril-X
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21a
symmetry Space Group: P 64 2 2
R_factor 0.214 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
148.499 148.499 106.967 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand
enzyme Hydrolase E.C.3.6.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • ATPase activity, coupled to ...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (2yz2.pdb1.gz) 368 Kb
  • Biological Unit Coordinates (2yz2.pdb2.gz) 184 Kb
  • CSU: Contacts of Structural Units for 2YZ2
  • Likely Quarternary Molecular Structure file(s) for 2YZ2
  • Retrieve 2YZ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YZ2 from S2C, [Save to disk]
  • View 2YZ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YZ2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2YZ2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yz2] [2yz2_B] [2yz2_A]
  • SWISS-PROT database: [Q9WY65]
  • Belongs to the atp-binding cassette (abc) superfamily according to TCDB.
  • Domain organization of [Y222_THEMA] by SWISSPFAM
  • Domain found in 2YZ2: [AAA ] by SMART
  • Other resources with information on 2YZ2
  • Community annotation for 2YZ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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