2Z02 Ligase date May 06, 2007
title Crystal Structure Of Phosphoribosylaminoimidazolesuccinocarb Synthase Wit Atp From Methanocaldococcus Jannaschii
authors M.Kanagawa, S.Baba, S.Kuramitsu, S.Yokoyama, G.Kawai, G.Sampei, Ri Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Phosphoribosylaminoimidazole-Succinocarboxamide S
Chain: A, B
Synonym: Saicar Synthetase
Ec: 6.3.2.6
Engineered: Yes
Organism_scientific: Methanocaldococcus Jannaschii
Organism_taxid: 2190
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21a
symmetry Space Group: P 21 21 21
R_factor 0.207 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.099 82.099 85.152 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.03 Å
ligand ATP, CIT, SO4 enzyme Ligase E.C.6.3.2.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (2z02.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 2Z02
  • CSU: Contacts of Structural Units for 2Z02
  • Likely Quarternary Molecular Structure file(s) for 2Z02
  • Structure Factors (461 Kb)
  • Retrieve 2Z02 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Z02 from S2C, [Save to disk]
  • Re-refined 2z02 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Z02 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Z02
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Z02, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2z02] [2z02_B] [2z02_A]
  • SWISS-PROT database: [Q58987]
  • Domain organization of [PUR7_METJA] by SWISSPFAM
  • Other resources with information on 2Z02
  • Community annotation for 2Z02 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science