2Z21 Sugar Binding Protein date May 17, 2007
title Crystal Structure Of A Five Site Mutated Cyanovirin-N
authors R.Fromme, Z.Katilene, P.Fromme, G.Ghirlanda
compound source
Molecule: Cyanovirin-N
Chain: A, B
Synonym: Cv-N
Engineered: Yes
Mutation: Yes
Organism_scientific: Nostoc Ellipsosporum
Organism_taxid: 45916
Gene: Cyanovirin-N
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M51
symmetry Space Group: P 1 21 1
R_factor 0.164 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.457 38.143 56.039 90.00 99.98 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA Monovalent Mutant of Cyanovirin-N Provides Insight into the Role of Multiple Interactions with gp120 for Antiviral Activity(,)., Fromme R, Katiliene Z, Giomarelli B, Bogani F, Mahon JM, Mori T, Fromme P, Ghirlanda G, Biochemistry. 2007 Jul 18;. PMID:17636873
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (2z21.pdb1.gz) 70 Kb
  • CSU: Contacts of Structural Units for 2Z21
  • Likely Quarternary Molecular Structure file(s) for 2Z21
  • Structure Factors (309 Kb)
  • Retrieve 2Z21 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Z21 from S2C, [Save to disk]
  • Re-refined 2z21 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Z21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Z21
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Z21, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2z21] [2z21_A] [2z21_B]
  • SWISS-PROT database: [P81180]
  • Domain organization of [CVN_NOSEL] by SWISSPFAM
  • Domain found in 2Z21: [CVNH ] by SMART
  • Other resources with information on 2Z21
  • Community annotation for 2Z21 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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