2Z43 Recombination date Jun 12, 2007
title Structure Of A Twinned Crystal Of Rada
authors L.T.Chen, T.P.Ko, A.H.J.Wang, T.F.Wang
compound source
Molecule: Dna Repair And Recombination Protein Rada
Chain: A, B, C
Synonym: Dna Strand Exchange Protein
Engineered: Yes
Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 273057
Strain: P2
Gene: Rada
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32
symmetry Space Group: P 31
R_factor 0.191 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.553 99.553 99.412 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.93 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural and functional analyses of five conserved positively charged residues in the L1 and N-terminal DNA binding motifs of archaeal RADA protein., Chen LT, Ko TP, Chang YW, Lin KA, Wang AH, Wang TF, PLoS ONE. 2007 Sep 12;2(9):e858. PMID:17848989
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (2z43.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (2z43.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (2z43.pdb3.gz) 54 Kb
  • CSU: Contacts of Structural Units for 2Z43
  • Structure Factors (810 Kb)
  • Retrieve 2Z43 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Z43 from S2C, [Save to disk]
  • Re-refined 2z43 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Z43 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Z43
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Z43, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2z43_C] [2z43_A] [2z43] [2z43_B]
  • SWISS-PROT database: [Q55075]
  • Domain organization of [RADA_SULSO] by SWISSPFAM
  • Domain found in 2Z43: [AAA ] by SMART
  • Other resources with information on 2Z43
  • Community annotation for 2Z43 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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