2ZBF	Hydrolase	date	Oct 20, 2007
title	Calcium Pump Crystal Structure With Bound Bef3 And Tg In The Of Calcium
authors	C.Toyoshima, H.Ogawa, Y.Norimatsu
compound		source
Molecule: Sarcoplasmicendoplasmic Reticulum Calcium Atpase Chain: A Synonym: Calcium Pump 1, Serca1, Sr Ca(2+)-Atpase 1, Calciu Transporting Atpase Sarcoplasmic Reticulum Type, Fast Twitc Muscle Isoform, Endoplasmic Reticulum Class 12 Ca(2+) Atpa Ec: 3.6.3.8		Organism_scientific: Oryctolagus Cuniculus Organism_common: Rabbit Organism_taxid: 9986 Tissue: Skeletal Muscle (White)
symmetry	Space Group: P 21 21 2	R_factor 0.212 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.522 136.473 106.619 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	ACE, BEF, MG, TG1 BindingDB	enzyme	Hydrolase E.C.3.6.3.8 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump., Toyoshima C, Norimatsu Y, Iwasawa S, Tsuda T, Ogawa H, Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19831-6. Epub 2007 Dec 5. PMID:18077416

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk] Biological Unit Coordinates (2zbf.pdb1.gz) 162 Kb LPC: Ligand-Protein Contacts for 2ZBF CSU: Contacts of Structural Units for 2ZBF Likely Quarternary Molecular Structure file(s) for 2ZBF Retrieve 2ZBF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZBF from S2C, [Save to disk]

View 2ZBF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZBF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZBF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zbf_A] [2zbf] SWISS-PROT database: [P04191] Belongs to the p-type atpase (p-atpase) superfamily according to TCDB. Domain organization of [AT2A1_RABIT] by SWISSPFAM Domain found in 2ZBF: [Cation_ATPase_N ] by SMART

Other resources with information on 2ZBF

Community annotation for 2ZBF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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