2ZBH Hydrolase date Oct 20, 2007
title Crystal Structure Of The Complex Of Phospholipase A2 With Ba From Aerva Lanata At 2.6 A Resolution
authors S.Kumar, N.C.Damodar, R.Jain, N.Singh, S.Sharma, P.Kaur, M.Haridas A.Srinivasan, T.P.Singh
compound source
Molecule: Phospholipase A2 Vrv-Pl-Viiia
Chain: A
Synonym: Phospholipase A2, Phosphatidylcholine 2- Acylhydro Dpla2;
Ec: 3.1.1.4
Organism_scientific: Daboia Russellii Pulchella
Organism_taxid: 97228
Strain: Pulchella
symmetry Space Group: P 43
R_factor 0.197 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.926 52.926 48.477 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand BVL enzyme Hydrolase E.C.3.1.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (2zbh.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 2ZBH
  • CSU: Contacts of Structural Units for 2ZBH
  • Likely Quarternary Molecular Structure file(s) for 2ZBH
  • Structure Factors (58 Kb)
  • Retrieve 2ZBH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZBH from S2C, [Save to disk]
  • Re-refined 2zbh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZBH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZBH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZBH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zbh] [2zbh_A]
  • SWISS-PROT database: [P59071]
  • Domain organization of [PA28_DABRR] by SWISSPFAM
  • Domain found in 2ZBH: [PA2c ] by SMART
  • Other resources with information on 2ZBH
  • Community annotation for 2ZBH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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