2ZG8	Metal Binding Protein	date	Jan 18, 2008
title	Crystal Structure Of Pd(Allyl)Apo-H49afr
authors	S.Abe, J.Niemeyer, M.Abe, T.Ueno, T.Hikage, G.Erker, Y.Watanabe
compound		source
Molecule: Ferritin Light Chain Chain: X Synonym: Ferritin L Subunit Engineered: Yes Mutation: Yes		Organism_scientific: Equus Caballus Organism_common: Horse Organism_taxid: 9796 Gene: Ftl Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Nova Blue Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmk2
symmetry	Space Group: F 4 3 2	R_factor 0.188 R_Free 0.211
crystal cell	length a length b length c angle alpha angle beta angle gamma 181.339 181.339 181.339 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	CD, EDO, PD, PLL, SO4	enzyme
Gene Ontology	Chain Function Process Component X
Primary reference	Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage., Abe S, Niemeyer J, Abe M, Takezawa Y, Ueno T, Hikage T, Erker G, Watanabe Y, J Am Chem Soc. 2008 Aug 13;130(32):10512-4. Epub 2008 Jul 18. PMID:18636721

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk] Biological Unit Coordinates (2zg8.pdb1.gz) 806 Kb LPC: Ligand-Protein Contacts for 2ZG8 CSU: Contacts of Structural Units for 2ZG8 Likely Quarternary Molecular Structure file(s) for 2ZG8 Structure Factors (490 Kb) Retrieve 2ZG8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZG8 from S2C, [Save to disk] Re-refined 2zg8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ZG8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZG8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZG8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zg8] [2zg8_X] SWISS-PROT database: [P02791] Domain organization of [FRIL_HORSE] by SWISSPFAM

Other resources with information on 2ZG8

Community annotation for 2ZG8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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