2ZOY	Gene Regulation	date	Jun 20, 2008
title	The Multi-Drug Binding Transcriptional Repressor Cgmr (Cgl26 Protein) From C.Glutamicum
authors	H.Itou, M.Yao, N.Watanabe, I.Tanaka
compound		source
Molecule: Transcriptional Regulator Chain: A, B Synonym: Bacterial Regulatory Protein, Tetr Family, Cgl2612 Engineered: Yes		Organism_scientific: Corynebacterium Glutamicum Atcc 13032 Organism_common: Corynebacterium Glutamicum Organism_taxid: 196627 Strain: Atcc13032 Gene: Cgl2612 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21star(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet26b
symmetry	Space Group: P 21 21 21	R_factor 0.200 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.754 67.051 101.326 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GOL	enzyme
note	2ZOY supersedes 1V7B
Gene Ontology	Chain Function Process Component A, B
Primary reference	The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis., Itou H, Okada U, Suzuki H, Yao M, Wachi M, Watanabe N, Tanaka I, J Biol Chem. 2005 Nov 18;280(46):38711-9. Epub 2005 Sep 15. PMID:16166084

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (2zoy.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 2ZOY CSU: Contacts of Structural Units for 2ZOY Likely Quarternary Molecular Structure file(s) for 2ZOY Structure Factors (270 Kb) Retrieve 2ZOY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZOY from S2C, [Save to disk] Re-refined 2zoy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ZOY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZOY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZOY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zoy_B] [2zoy] [2zoy_A] SWISS-PROT database: [Q8NMG3] Domain organization of [Q8NMG3_CORGL] by SWISSPFAM

Other resources with information on 2ZOY

Community annotation for 2ZOY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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