2ZQ3 Hydrolase date Aug 03, 2008
title The Crystal Structure Of The Orthorhombic Form Of Hen Egg White Lysozyme At 1.6 Angstroms Resolution
authors S.Aibara, A.Suzuki, A.Kidera, K.Shibata, M.Hirose
compound source
Molecule: Lysozyme C
Chain: A
Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv
Ec: 3.2.1.17
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 21 21 21
R_factor 0.192 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.542 67.492 30.389 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand NA enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (2zq3.pdb1.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 2ZQ3
  • CSU: Contacts of Structural Units for 2ZQ3
  • Likely Quarternary Molecular Structure file(s) for 2ZQ3
  • Structure Factors (257 Kb)
  • Retrieve 2ZQ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZQ3 from S2C, [Save to disk]
  • Re-refined 2zq3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2ZQ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2ZQ3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZQ3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zq3_A] [2zq3]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 2ZQ3: [LYZ1 ] by SMART
    • Other resources with information on 2ZQ3
  • Community annotation for 2ZQ3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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