2ZR7 Hydrolase date Aug 25, 2008
title Msreca Native Form II'
authors J.R.Prabu, G.P.Manjunath, N.R.Chandra, K.Muniyappa, M.Vijayan
compound source
Molecule: Protein Reca
Chain: A
Synonym: Recombinase A, Msreca Native Form II'
Ec: 3.4.99.37
Engineered: Yes
Organism_scientific: Mycobacterium Smegmatis Str. Mc2 155
Organism_taxid: 246196
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jc10289
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pthioa
symmetry Space Group: P 61
R_factor 0.221 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.619 103.619 74.410 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.60 Å
ligand PO4 enzyme Hydrolase E.C.3.4.99.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctionally important movements in RecA molecules and filaments: studies involving mutation and environmental changes., Prabu JR, Manjunath GP, Chandra NR, Muniyappa K, Vijayan M, Acta Crystallogr D Biol Crystallogr. 2008 Nov;64(Pt 11):1146-57. Epub 2008, Oct 18. PMID:19020353
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2zr7.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2ZR7
  • CSU: Contacts of Structural Units for 2ZR7
  • Likely Quarternary Molecular Structure file(s) for 2ZR7
  • Structure Factors (45 Kb)
  • Retrieve 2ZR7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZR7 from S2C, [Save to disk]
  • Re-refined 2zr7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZR7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZR7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZR7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zr7_A] [2zr7]
  • SWISS-PROT database: [Q59560]
  • Domain organization of [RECA_MYCS2] by SWISSPFAM
  • Domain found in 2ZR7: [AAA ] by SMART
  • Other resources with information on 2ZR7
  • Community annotation for 2ZR7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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