2ZTH Transferase date Oct 01, 2008
title Crystal Structure Of Holo Form Of Rat Catechol-O-Methyltrans
authors E.Tsuji
compound source
Molecule: Catechol O-Methyltransferase
Chain: A
Ec: 2.1.1.6
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-2t
symmetry Space Group: P 21 21 21
R_factor 0.187 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.903 61.089 105.369 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand MG, SAM enzyme Transferase E.C.2.1.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of the Apo and Holo form of rat catechol-O-methyltransferase., Tsuji E, Okazaki K, Isaji M, Takeda K, J Struct Biol. 2008 Dec 10. PMID:19111934
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (2zth.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 2ZTH
  • CSU: Contacts of Structural Units for 2ZTH
  • Likely Quarternary Molecular Structure file(s) for 2ZTH
  • Structure Factors (51 Kb)
  • Retrieve 2ZTH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZTH from S2C, [Save to disk]
  • Re-refined 2zth structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZTH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZTH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZTH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zth] [2zth_A]
  • SWISS-PROT database: [P22734]
  • Domain organization of [COMT_RAT] by SWISSPFAM
  • Other resources with information on 2ZTH
  • Community annotation for 2ZTH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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