2ZU1 Hydrolase date Oct 12, 2008
title Crystal Structure Of Cvb3 3c Protease Mutant C147a
authors C.C.Lee, Y.C.Tsui, A.H.J.Wang
compound source
Molecule: 3c Proteinase
Chain: A, B
Ec: 3.4.22.28
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Coxsackievirus B3
Organism_taxid: 12072
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet16b
symmetry Space Group: P 1 21 1
R_factor 0.166 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.010 64.690 68.660 90.00 91.19 90.00
method X-Ray Diffractionresolution 1.38 Å
ligand
enzyme Hydrolase E.C.3.4.22.28 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds., Lee CC, Kuo CJ, Ko TP, Hsu MF, Tsui YC, Chang SC, Yang S, Chen SJ, Chen HC, Hsu MC, Shih SR, Liang PH, Wang AH, J Biol Chem. 2009 Mar 20;284(12):7646-7655. Epub 2009 Jan 14. PMID:19144641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (2zu1.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (2zu1.pdb2.gz) 34 Kb
  • Biological Unit Coordinates (2zu1.pdb3.gz) 67 Kb
  • CSU: Contacts of Structural Units for 2ZU1
  • Likely Quarternary Molecular Structure file(s) for 2ZU1
  • Structure Factors (925 Kb)
  • Retrieve 2ZU1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZU1 from S2C, [Save to disk]
  • Re-refined 2zu1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZU1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZU1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZU1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zu1] [2zu1_B] [2zu1_A]
  • SWISS-PROT database: [P03313]
  • Domain organization of [POLG_CXB3N] by SWISSPFAM
  • Other resources with information on 2ZU1
  • Community annotation for 2ZU1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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