2ZU2	Hydrolase Hydrolase Inhibitor	date	Oct 12, 2008
title	Complex Structure Of Cov 229e 3cl Protease With Epdtc
authors	C.C.Lee, A.H.J.Wang
compound		source
Molecule: 3c-Like Proteinase Chain: A, B Synonym: 3cl-Pro, 3clp, M-Pro, P34, Nsp5 Ec: 3.4.22.- Engineered: Yes		Organism_scientific: Human Coronavirus Organism_common: Hcov-229e Organism_taxid: 11137 Strain: 229e Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: P 1 21 1	R_factor 0.187 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.470 76.810 76.670 90.00 90.96 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	DTZ, MPD	enzyme	Hydrolase E.C.3.4.22 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds., Lee CC, Kuo CJ, Ko TP, Hsu MF, Tsui YC, Chang SC, Yang S, Chen SJ, Chen HC, Hsu MC, Shih SR, Liang PH, Wang AH, J Biol Chem. 2009 Mar 20;284(12):7646-7655. Epub 2009 Jan 14. PMID:19144641

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (2zu2.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 2ZU2 CSU: Contacts of Structural Units for 2ZU2 Likely Quarternary Molecular Structure file(s) for 2ZU2 Structure Factors (824 Kb) Retrieve 2ZU2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZU2 from S2C, [Save to disk] Re-refined 2zu2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ZU2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZU2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZU2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zu2_A] [2zu2_B] [2zu2] SWISS-PROT database: [P0C6U2] Domain organization of [R1A_CVH22] by SWISSPFAM

Other resources with information on 2ZU2

Community annotation for 2ZU2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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