2ZUC Recombination date Oct 15, 2008
title Crystal Structure Of Left-Handed Rada Filament
authors Y.W.Chang, T.P.Ko, T.F.Wang, A.H.J.Wang
compound source
Molecule: Dna Repair And Recombination Protein Rada
Chain: A, B
Engineered: Yes
Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 2287
Gene: Rada
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32 Xalic
symmetry Space Group: P 21 21 21
R_factor 0.228 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.143 114.792 136.084 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree new structures of left-handed RADA helical filaments: structural flexibility of N-terminal domain is critical for recombinase activity., Chang YW, Ko TP, Lee CD, Chang YC, Lin KA, Chang CS, Wang AH, Wang TF, PLoS ONE. 2009;4(3):e4890. Epub 2009 Mar 19. PMID:19295907
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (2zuc.pdb1.gz) 93 Kb
  • CSU: Contacts of Structural Units for 2ZUC
  • Likely Quarternary Molecular Structure file(s) for 2ZUC
  • Structure Factors (93 Kb)
  • Retrieve 2ZUC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZUC from S2C, [Save to disk]
  • Re-refined 2zuc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZUC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZUC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZUC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zuc_B] [2zuc] [2zuc_A]
  • SWISS-PROT database: [Q55075]
  • Domain organization of [RADA_SULSO] by SWISSPFAM
  • Domain found in 2ZUC: [AAA ] by SMART
  • Other resources with information on 2ZUC
  • Community annotation for 2ZUC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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