315D Dna-Rna Hybrid date Feb 26, 1997
title Crystal Structure Of An Alternating Octamer R(Guaugua)D(C) W Adjacent G-U Wobble Pairs
authors R.Biswas, M.C.Wahl, C.Ban, M.Sundaralingam
compound source
Molecule: Dnarna (5'-R(Gpupapupgpupap)-D(C)-3')
Chain: A, B
Engineered: Yes
Synthetic: Yes
symmetry Space Group: H 3
R_factor 0.176 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.710 39.710 68.150 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.38 Å
Primary referenceCrystal structure of an alternating octamer r(GUAUGUA)dC with adjacent G x U wobble pairs., Biswas R, Wahl MC, Ban C, Sundaralingam M, J Mol Biol 1997 Apr 18;267(5):1149-56. PMID:9150403
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (315d.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 315D
  • Likely Quarternary Molecular Structure file(s) for 315D
  • Retrieve 315D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 315D from S2C, [Save to disk]
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 315D, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [315d_A] [315d_B] [315d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 315D
  • Community annotation for 315D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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