3A9E	Transcription	date	Oct 24, 2009
title	Crystal Structure Of A Mixed Agonist-Bound Rar-Alpha And Ant Bound Rxr-Alpha Heterodimer Ligand Binding Domains
authors	Y.Sato, S.Duclaud, C.Peluso-Iltis, P.Poussin, D.Moras, N.Rochel, S Proteomics In Europe (Spine)
compound		source
Molecule: Retinoic Acid Receptor Rxr-Alpha Chain: A Fragment: Ligand Binding Domain Synonym: Retinoid X Receptor Alpha, Nuclear Receptor Subfam Group B Member 1; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Rxra, Nr2b1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3a
Molecule: Retinoic Acid Receptor Alpha Chain: B Fragment: Ligand Binding Domain Synonym: Rar-Alpha, Nuclear Receptor Subfamily 1 Group B Me Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rara, Nr1b1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
Molecule: 13-Mer (Lxxll Motif) From Nuclear Receptor Coacti Chain: I Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: The Peptide Was Chemically Synthesized.
symmetry	Space Group: P 43 21 2	R_factor 0.201 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.300 105.300 111.338 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.75 Å
ligand	754, REA BindingDB	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	The "Phantom Effect" of the Rexinoid LG100754: structural and functional insights., Sato Y, Ramalanjaona N, Huet T, Potier N, Osz J, Antony P, Peluso-Iltis C, Poussin-Courmontagne P, Ennifar E, Mely Y, Dejaegere A, Moras D, Rochel N, PLoS One. 2010 Nov 30;5(11):e15119. doi: 10.1371/journal.pone.0015119. PMID:21152046

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk] Biological Unit Coordinates (3a9e.pdb1.gz) 161 Kb Biological Unit Coordinates (3a9e.pdb2.gz) 319 Kb LPC: Ligand-Protein Contacts for 3A9E CSU: Contacts of Structural Units for 3A9E Structure Factors (140 Kb) Retrieve 3A9E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3A9E from S2C, [Save to disk] Re-refined 3a9e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3A9E in 3D

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Visual 3D analysis of 3A9E

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3A9E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3a9e] [3a9e_B] [3a9e_A] [3a9e_I] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3A9E: [HOLI ] by SMART

Other resources with information on 3A9E

Community annotation for 3A9E at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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