3ACG Hydrolase date Jan 04, 2010
title Crystal Structure Of Carbohydrate-Binding Module Family 28 F Clostridium Josui Cel5a In Complex With Cellobiose
authors K.Tsukimoto, R.Takada, Y.Araki, K.Suzuki, S.Karita, T.Wakagi, H.Sh T.Watanabe, S.Fushinobu
compound source
Molecule: Beta-1,4-Endoglucanase
Chain: A
Fragment: Unp Residues 560-752
Synonym: Carbohydrate-Binding Module Family 28
Ec: 3.2.1.4
Engineered: Yes
Organism_scientific: Clostridium Josui
Organism_taxid: 1499
Gene: Cela
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: P 21 21 21
R_factor 0.147 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.468 63.820 75.449 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand BGC, CA, GOL, PO4 enzyme Hydrolase E.C.3.2.1.4 BRENDA
Primary referenceRecognition of cellooligosaccharides by a family 28 carbohydrate-binding module., Tsukimoto K, Takada R, Araki Y, Suzuki K, Karita S, Wakagi T, Shoun H, Watanabe T, Fushinobu S, FEBS Lett. 2010 Feb 14. PMID:20159017
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (3acg.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 3ACG
  • CSU: Contacts of Structural Units for 3ACG
  • Structure Factors (438 Kb)
  • Retrieve 3ACG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ACG from S2C, [Save to disk]
  • Re-refined 3acg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ACG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ACG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ACG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3acg] [3acg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ACG
  • Community annotation for 3ACG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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